Para instalar o StructRNAfinder
DOWNLOAD and collaborate on StructRNAfinder development by accessing in our GitHub account. All information to install and run it can be accessed there.
Installing the stand-alone version: (Only for linux)
To see more details related to the installation process please see the INSTALL file.
To install structRNAfinder and its requirements, type in a terminal located in structRNAfinder folder:
sudo sh install.sh
And follow the provided instructions.
Pre-Requisites:
StructRNAfinder uses third-part softwares and in-house Perl scripts in order to perform all its workflow. All them are automatically installed and configured when installing the tool. Bellow a list of softwares necessary to use it.
Installing the stand-alone version: (Only for linux)
To see more details related to the installation process please see the INSTALL file.
To install structRNAfinder and its requirements, type in a terminal located in structRNAfinder folder:
sudo sh install.sh
And follow the provided instructions.
Pre-Requisites:
StructRNAfinder uses third-part softwares and in-house Perl scripts in order to perform all its workflow. All them are automatically installed and configured when installing the tool. Bellow a list of softwares necessary to use it.
- Perl
- Linux perl library libgd-perl (apt-get install libgd-perl)
- Perl package Bio::Graphics(cpan install Bio::Graphics)
- Infernal
- RNAfold from Vienna package
- Rfam covariance models (Version 12)
As vezes tem que instalar o Bio::Graphics de novo
depois, baixar RFAM mais novo
e dar o comando
cmpress Rfam.cm
caso contrário não irá funcionar
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