R merge

setwd ('/data/project/flowers/orthologous/transcriptional_factors')
lista1 <- read.delim(file='TFs.list', header=F, stringsAsFactors=F)
lista2 <- read.delim(file='PlantTFDB-allxUame-Purple_assm_id60_moresensitive_cov60', header=F, stringsAsFactors=F)
colnames(lista1) <- c('ID', 'Desc')
colnames(lista2) <- c('Transcript', 'ID', 'pident', 'length', 'mismatch', 'gapopen', 'qstart', 'qend', 'sstart', 'send', 'evalue', 'bitscore')
head (lista1)
head (lista2)

merged_list <-  merge(x=lista1, y=lista2, by.x='ID', by.y='ID')
head (merged_list)
dim(merged_list)
library(xlsx)
#write.xlsx(merged_list, 'Uame-Purple-merged.list.xls')
write.table(merged_list, file='Uame-Purple-merged.list.txt', row.names=F, col.names=T, quote=F, sep="\t")

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