srsilva Notas

DIAMOND+LCA DIAMOND (version 0.3.9) was run using the following command: diamond blastx –db /ifs/mirror/diamond/nr –query < input.fastq > -v 2 –threads 16 -o < diamond.output.tsv > LCA mapper (from mtools, MEGAN5) was run using: lcamapper.sh -i < diamond.output.tsv > -f Detect -ms 50 -me 0.01 -tp 50 -gt megan/ gi_taxid_prot.bin -o <lca.output> https://nickilottmetagenomics.wordpress.com/2015/01/19/comparing-diamond-lca-against-kraken/

ps -auxw | grep "programa" | less

apagar tudo até o final da linha a partir do padrão no VIM   : g /{ pattern }/ normal nd$

verificar se um programa esta rodando  ps -auxw | grep "filterMatches.pl" | less - ex "filterMatches.pl" -> programa a ser verificado se esta rodando